PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221374.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 571aa    MW: 62181.6 Da    PI: 7.1527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221374.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000284674991855
                     HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++  L++++ +      +K + a++L +A++YIk Lq
  XP_008221374.1 467 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 499
                     6788888888887.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.29449498IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-8464505IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-9464507IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.23E-4467503No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MQASTLILNQ TPPLVLKIAI SSSSPQLAQP NWWDLHAAAG TGAAGSQLSS WSNLGINPWQ  60
PQQPNQKYSN SSNNCDDVDQ DVSISSTSFT NASNHSSLSV DSSRRLQVAD QRSASPNNDM  120
INGEQVSDNH IWNHVLLSVN GNNDLHHNDH DVGENFLDAL SSKSLSTDHV MYEPACDYLK  180
KLDNSTWEFT KYVSAASNNF NSFEKQLNGG FMENNNMNNN VNIENERLTK LSNLVSTWSI  240
APPEPQLVMD HDHHHYLKPQ AFINNDSTSC DAQMGNNNIT NRNSGSSLFS CYGSKVEAAC  300
VGGGGGGGGA LHGITPSFGN NNNGIEYQIG LNNVNAMVAD HHNGKYLYGN GSILPDSYSS  360
CGATSAGARN FADVISFSSR LGNKSALVDS HAPKPCFKSS NLSDQYSKKQ AASTRVSSGR  420
GQGIANEGKK KRTDDTSSET VLKKPKQETS TVSSSVKMQA PKVKLGDRIT ALQQIVSPFG  480
KTDTASVLYE AIQYIKFLQD QVHVLLSSPY LKTNSHKDPW ATDRKDHKGD VKVDLKNKGL  540
CLVPISCTPQ VYRENTGSDY WTPTYRGCLY R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221374.10.0PREDICTED: transcription factor bHLH111
TrEMBLM5XDY80.0M5XDY8_PRUPE; Uncharacterized protein
STRINGVIT_01s0010g02070.t011e-157(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101162629
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.13e-54bHLH family protein